PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7S11

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	92.3	H1	13	H1-13-*	-1	TVSGLSLTTNSVS	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H2	9	H2-9-1	11	VIWSNGGTD	BBBAALBBB
H	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H3	12	H3-12-*	-1	ARNFPYPGINFD	BBLBaBaLBLBB
H	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H4	8	H4-8-1	8	RDTSKSQV	BBAAALBB
I	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	92.3	H1	13	H1-13-1	18	TVSGLSLTTNSVS	BBBLBBAAABBBB
I	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H2	9	H2-9-1	11	VIWSNGGTD	BBBAALBBB
I	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H3	12	H3-12-*	-1	ARNFPYPGINFD	BBLBEBaLBLBB
I	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H4	8	H4-8-1	10	RDTSKSQV	BBAAALBB
J	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	92.3	H1	13	H1-13-1	17	TVSGLSLTTNSVS	BBBLBBAAABBBB
J	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H2	9	H2-9-1	11	VIWSNGGTD	BBBAALBBB
J	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H3	12	H3-12-*	-1	ARNFPYPGINFD	BBLBEBaLAABB
J	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H4	8	H4-8-1	9	RDTSKSQV	BBAAALBB
K	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	92.3	H1	13	H1-13-1	18	TVSGLSLTTNSVS	BBBLBBAAABBBB
K	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H2	9	H2-9-1	11	VIWSNGGTD	BBBAALBBB
K	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H3	12	H3-12-*	-1	ARNFPYPGINFD	BBLBEBaLAABB
K	heavy	Rattus.norvegicus	Ra_IGHV2-47*01	98.6	Ra_IGHV2-47*01	100.0	H4	8	H4-8-1	25	RDTSKSQV	BBAAALBB
L	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L1	14	L1-14-1	13	HSSTGAVTtSNYAN	BBAAEBBBAAALBB
L	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	87.5	L2	8	L2-8-1	8	GGTSNRAP	BLEABBBB
L	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	75.0	L3	9	L3-9-1	22	SLWYSGHLI	BBBBLLBBB
L	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L4	6	L4-6-2	22	LLEGKA	BBEABB
M	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L1	14	L1-14-1	13	HSSTGAVTtSNYAN	BBAAEBBBAAALBB
M	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	87.5	L2	8	L2-8-1	9	GGTSNRAP	BLLABBBB
M	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	75.0	L3	9	L3-9-1	22	SLWYSGHLI	BBBBLLBBB
M	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L4	6	L4-6-*	-1	LLEGKA	BBLLBB
N	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L1	14	L1-14-1	13	HSSTGAVTtSNYAN	BBAAEBBBAAALBB
N	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	87.5	L2	8	L2-8-1	8	GGTSNRAP	BLLABBBB
N	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	75.0	L3	9	L3-9-1	21	SLWYSGHLI	BBBBLLBBB
N	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L4	6	L4-6-*	-1	LLEGKA	BBLLBB
O	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L1	14	L1-14-1	13	HSSTGAVTtSNYAN	BBAAEBBBAAALBB
O	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	87.5	L2	8	L2-8-1	8	GGTSNRAP	BLLABBBB
O	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	75.0	L3	9	L3-9-1	23	SLWYSGHLI	BBBBLLBBB
O	lambda	Rattus.norvegicus	Ra_IGLV1S1*01	92.6	Ra_IGLV1S1*01	100.0	L4	6	L4-6-2	20	LLEGKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024