PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KN3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	69.2	H1	13	H1-13-1	12	AASGFTVSLSHMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	22.2	H2	9	H2-9-1	9	ITYGDGNSD	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	100.0	H3	10	H3-10-*	-1	AREYYYGMDV	BBBBAAEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-1	6	KSSQSVlyssnnKNYLA	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	7	QQYYSLPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	69.2	H1	13	H1-13-1	12	AASGFTVSLSHMN	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	22.2	H2	9	H2-9-1	10	ITYGDGNSD	BBBAALBBB
M	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	100.0	H3	10	H3-10-*	-1	AREYYYGMDV	BBBBAAEBAB
M	heavy	Homo.sapiens	Hu_IGHV3-66*03	97.3	Hu_IGHV3-66*03	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-1	5	KSSQSVlyssnnKNYLA	BBABBABBAAALBBBBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	8	QQYYSLPLT	BBAABBbBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024