PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KFW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	12	AASGFTVSSNYMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	9	VIYSGGTTY	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	100.0	H3	14	H3-14-*	-1	ARGDVSGYRYGLDY	BBEBABLBAAEBAB
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	9	RDNSKNTV	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	9	RASQGISSYLA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	9	YAASTLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-*	-1	QQLNSYPGT	BBAABBaLB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	16	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	12	AASGFTVSSNYMS	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	10	VIYSGGTTY	BBBAALBBB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	100.0	H3	14	H3-14-*	-1	ARGDVSGYRYGLDY	BBEBABLBAAEBAB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	8	RDNSKNTV	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	8	RASQGISSYLA	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	5	YAASTLQS	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-*	-1	QQLNSYPGT	BBAABBaLB
G	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	16	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	12	AASGFTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	9	VIYSGGTTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	100.0	H3	14	H3-14-*	-1	ARGDVSGYRYGLDY	BBEBABLBAAEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	97.3	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	8	RDNSKNTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	9	RASQGISSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	6	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-*	-1	QQLNSYPGT	BBAABBaLB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024