PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JIE

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	92.3	H1	13	H1-13-*	-1	KASGGTVSSYAIS	BBBLEBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80.0	H2	10	H2-10-1	16	GIIPIFDTTN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100.0	H3	28	H3-28-*	-1	ARDRVPSYspsrrfstkgamwgKYGMDV
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	75.0	H4	8	H4-8-*	-1	ADESTGTS	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	8	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	4	YLGSNRAS	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L3	9	L3-9-cis7-1	6	MQALQTPRT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	92.3	H1	13	H1-13-1	25	KASGGTVSSYAIS	BBBLEBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80.0	H2	10	H2-10-1	14	GIIPIFDTTN	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100.0	H3	28	H3-28-*	-1	ARDRVPSYspsrrfstkgamwgKYGMDV
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	75.0	H4	8	H4-8-*	-1	ADESTGTS	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	6	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	6	YLGSNRAS	BLEABBBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L3	9	L3-9-cis7-1	8	MQALQTPRT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024