PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CU5

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Mo_IGHV5-9*01	92.3	H1	13	H1-13-1	10	AASGFTFSSYMMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Mo_IGHV5-9*01	90.0	H2	10	H2-10-2	8	TISGGGANTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H3	9	H3-9-*	-1	ARQLYYFDY	BBBBABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	6	RDNAKNSL	BBAAALBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-98*01	90.9	L1	11	L1-11-1	13	LASQTIGTWLT	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-98*01	87.5	L2	8	L2-8-1	13	YTATSLAD	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	11	QQVYSIPWT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-98*01	90.9	L1	11	L1-11-1	13	LASQTIGTWLT	BBABBAEAABB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-98*01	87.5	L2	8	L2-8-1	17	YTATSLAD	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	13	QQVYSIPWT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Mo_IGHV5-9*01	92.3	H1	13	H1-13-1	12	AASGFTFSSYMMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Mo_IGHV5-9*01	90.0	H2	10	H2-10-2	8	TISGGGANTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H3	9	H3-9-2	19	ARQLYYFDY	BBBAABBAB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	6	RDNAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024