PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7BBJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Mo_IGHV1-5*01	84.6	H1	13	H1-13-1	9	KASGYTFTTYWMH	BBBLBBAAABBBB
H	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Mo_IGHV1-5*01	80.0	H2	10	H2-10-1	15	AIYPGLSDTT	BBBAAALBBB
H	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H3	10	H3-10-*	-1	ARLLDYAMDY	BBBAAABBAB
H	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H4	8	H4-8-1	11	RDTSTSTV	BBAAALBB
L	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Mo_IGKV10-94*03	81.8	L1	11	L1-11-2	11	RASQDIRSYLN	BBABBALLBBB
L	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Mo_IGKV10-94*03	87.5	L2	8	L2-8-1	12	WYTSRLHS	BLEABBBB
L	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Hu_IGKV1-NL1*01	42.9	L3	9	L3-9-cis7-1	7	QQGETLPWT	BBAABBbBB
L	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Hu_IGKV1-NL1*01	100.0	L4	6	L4-6-1	10	GSGTDY	EBEABB
M	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Mo_IGHV1-5*01	84.6	H1	13	H1-13-1	9	KASGYTFTTYWMH	BBBLBBAAABBBB
M	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Mo_IGHV1-5*01	80.0	H2	10	H2-10-1	15	AIYPGLSDTT	BBBAAALBBB
M	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H3	10	H3-10-*	-1	ARLLDYAMDY	BBBAAABBAB
M	heavy	Unidentified	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H4	8	H4-8-1	10	RDTSTSTV	BBAAALBB
N	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Mo_IGKV10-94*03	81.8	L1	11	L1-11-2	11	RASQDIRSYLN	BBABBALLBBB
N	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Mo_IGKV10-94*03	87.5	L2	8	L2-8-1	12	WYTSRLHS	BLEABBBB
N	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Hu_IGKV1-NL1*01	42.9	L3	9	L3-9-cis7-1	7	QQGETLPWT	BBAABBbBB
N	kappa	Unidentified	Hu_IGKV1-NL1*01	95.7	Hu_IGKV1-NL1*01	100.0	L4	6	L4-6-1	10	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024