PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XKP

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	92.3	H1	13	H1-13-1	5	AASGFTFSDYYMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H2	10	H2-10-2	11	YISSSGSTIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H3	22	H3-22-*	-1	ARARGSSGWYrigtrwgnWFDP
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H4	8	H4-8-1	3	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	7	TGTSSDVGgYNYVS	BBBAAAAAABBBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L2	8	L2-8-1	10	YEVSNRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	77.8	L3	10	L3-10-1	11	SSYTSSSNVV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	92.3	H1	13	H1-13-1	4	AASGFTFSDYYMT	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H2	10	H2-10-2	11	YISSSGSTIY	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H3	22	H3-22-*	-1	ARARGSSGWYrigtrwgnWFDP
M	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	7	TGTSSDVGgYNYVS	BBBAAAAAABABBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L2	8	L2-8-*	-1	YEVSNRPS	BLEABBBA
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	77.8	L3	10	L3-10-1	11	SSYTSSSNVV	BBBBAALBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	11	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024