PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6X4T

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYWMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	13	YIKQDGNEKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H3	14	H3-14-*	-1	AREGILWFGDLPTF	BBBBABABBABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYWMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	13	YIKQDGNEKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H3	14	H3-14-*	-1	AREGILWFGDLPTF	BBBBABABBABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	100.0	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	90.9	L1	11	L1-11-1	6	RASQGISNWLA	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	100.0	L2	8	L2-8-1	7	YAASSLQS	BLEABBBB
E	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	85.7	L3	9	L3-9-cis7-1	8	QQYDSYPRT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
F	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	90.9	L1	11	L1-11-*	-1	RASQGISNWLA	BBABBBBLBBB
F	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	100.0	L2	8	L2-8-1	7	YAASSLQS	BLEABBBB
F	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	85.7	L3	9	L3-9-cis7-1	7	QQYDSYPRT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1D-16*01	100.0	Hu_IGKV1D-16*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024