PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VBO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	76.9	H1	13	H1-13-1	7	KGSGYKFSDYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	11	IIYPGDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	50.0	H3	9	H3-9-*	-1	AIVGAKADY	BBBLBABBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	8	ADKSINTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	94.2	Hu_IGKV2-30*02	100.0	L1	16	L1-16-1	9	RSSQSLvhsdgNTYLN	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	94.2	Hu_IGKV2-30*02	87.5	L2	8	L2-8-1	3	YKVSDRDS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	94.2	Hu_IGKV2-30*02	71.4	L3	8	L3-8-*	-1	MQGTHPFT	BBABBaLB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	94.2	Hu_IGKV2-30*02	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024