PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UUP

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	53.8	H1	13	H1-13-*	-1	AASRRSSRSWAMH	BBABBBAABABBB
A	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	80.0	H2	10	H2-10-2	6	VISYDGRLKY	BBBAALABBB
A	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	50.0	H3	12	H3-12-*	-1	AAEEGDGGFFDY	BBBBABEBABAB
A	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	37.5	H4	8	H4-8-*	-1	RDNaeYLV
A	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	7	SGSSSNIGSNYVN	BBBAAAAAABBBB
A	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	87.5	L2	8	L2-8-1	11	YRNNERPS	BLLABBBB
A	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDGSLSgRGV
A	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB
B	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	53.8	H1	13	H1-13-*	-1	AASRRSSRSWAMH	BBABBBAABABBB
B	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	80.0	H2	10	H2-10-2	6	VISYDGRLKY	BBBAALABBB
B	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	50.0	H3	12	H3-12-*	-1	AAEEGDGGFFDY	BBBBABEBABAB
B	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	37.5	H4	8	H4-8-1	7	RDNAEYLV	BBAAALBB
B	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	6	SGSSSNIGSNYVN	BBBAAAAAABBBB
B	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	87.5	L2	8	L2-8-1	9	YRNNERPS	BLLABBBB
B	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDGSlsgRGV
B	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB
C	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	53.8	H1	13	H1-13-*	-1	AASRRSSRSWAMH	BBABBBAABABBB
C	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	80.0	H2	10	H2-10-2	5	VISYDGRLKY	BBBAALABBB
C	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	50.0	H3	12	H3-12-*	-1	AAEEGDGGFFDY	BBBBABEBABAB
C	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	37.5	H4	8	H4-8-*	-1	RDNaeYLV
C	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	7	SGSSSNIGSNYVN	BBBAAAAAABBBB
C	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	87.5	L2	8	L2-8-1	9	YRNNERPS	BLLABBBB
C	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDGSLSgRGV
C	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB
D	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	53.8	H1	13	H1-13-*	-1	AASRRSSRSWAMH	BBABBBAABABBB
D	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	80.0	H2	10	H2-10-2	6	VISYDGRLKY	BBBAALABBB
D	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	50.0	H3	12	H3-12-*	-1	AAEEGDGGFFDY	BBBBABEBABAB
D	heavy	Camelidae.mixed.library	Hu_IGHV3-30-3*02	89.0	Hu_IGHV3-30-3*02	37.5	H4	8	H4-8-1	11	RDNAEYLV	BBAAALBB
D	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	6	SGSSSNIGSNYVN	BBBAAAAAABBBB
D	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	87.5	L2	8	L2-8-1	12	YRNNERPS	BLEABBBB
D	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDGSlsgRGV
D	lambda	Camelidae.mixed.library	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	L4	6	L4-6-2	12	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024