PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UC6

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-1	20	GASGMSLDYYAIA	BBBLBBAAABBBB
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	60.0	H2	10	H2-10-2	10	CISVSGSSAQ	BBBAALABBB
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	0.0	H3	18	H3-18-*	-1	AALADCagyaSLTFDFDS
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	50.0	H4	8	H4-8-1	9	KDNTKSTA	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-1	20	GASGMSLDYYAIA	BBBLBBAAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	60.0	H2	10	H2-10-2	10	CISVSGSSAQ	BBBAALABBB
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	0.0	H3	18	H3-18-*	-1	AALADCagyaSLTFDFDS
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	86.3	Al_IGHV3S65*01_VHH	50.0	H4	8	H4-8-1	9	KDNTKSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024