PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6U59

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	CDRLenMismatch	-1.0	L1	12	L1-12-*	-1	QASQSRgNNYLS	BBBLBAEAAABB
E	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	75.0	L2	8	L2-8-*	-1	YRTSTLAS	ABAABBBB
E	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	L3	13	L3-13-*	-1	LYgyysSRNPDFA	BBBBBBAABALBB
E	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	100.0	L4	6	L4-6-*	-1	GSGTQF	EBBLBB
F	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	CDRLenMismatch	-1.0	H1	13	H1-13-*	-1	KASGFDFSDYHVQ	BBBLBBBAABBBB
F	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	CDRLenMismatch	-1.0	H2	9	H2-9-1	14	GIAYTGNIY	EBBAALBBB
F	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	100.0	H3	17	H3-17-*	-1	ARAYGYAsapYAQYFNL
F	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	100.0	H4	7	H4-7-*	-1	KTSSTTV	BABBLBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	CDRLenMismatch	-1.0	H1	13	H1-13-*	-1	KASGFDFSDYHVQ	BBBLBBBAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	CDRLenMismatch	-1.0	H2	9	H2-9-1	14	GIAYTGNIY	EBBAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	100.0	H3	17	H3-17-*	-1	ARAYGYAsapYAQYFNL
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	100.0	H4	7	H4-7-*	-1	KTSSTTV	BABBLBB
J	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	CDRLenMismatch	-1.0	L1	12	L1-12-*	-1	QASQSRgNNYLS	BBBLBAEAAABB
J	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	75.0	L2	8	L2-8-*	-1	YRTSTLAS	ABAABBBB
J	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	L3	13	L3-13-*	-1	LYgyysSRNPDFA	BBBBBBAABALBB
J	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	100.0	L4	6	L4-6-*	-1	GSGTQF	EBBLBB
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	CDRLenMismatch	-1.0	H1	13	H1-13-*	-1	KASGFDFSDYHVQ	BBBLBBBAABBBB
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	CDRLenMismatch	-1.0	H2	9	H2-9-1	14	GIAYTGNIY	EBBAALBBB
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	100.0	H3	17	H3-17-*	-1	ARAYGYAsapYAQYFNL
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	100.0	H4	7	H4-7-*	-1	KTSSTTV	BABBLBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	CDRLenMismatch	-1.0	L1	12	L1-12-*	-1	QASQSRgNNYLS	BBBLBAEAAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	75.0	L2	8	L2-8-*	-1	YRTSTLAS	ABAABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	L3	13	L3-13-*	-1	LYgyysSRNPDFA	BBBBBBAABALBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	100.0	L4	6	L4-6-*	-1	GSGTQF	EBBLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024