PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6RLM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	17	AASGFTFDDYAMY	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	25	QQYYTTPST	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	16	AASGFTFDDYAMY	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	25	QQYYTTPST	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	16	AASGFTFDDYAMY	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	25	QQYYTTPST	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	16	AASGFTFDDYAMY	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
H	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	26	QQYYTTPST	BBAABBbBB
H	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	17	AASGFTFDDYAMY	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	25	QQYYTTPST	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	17	AASGFTFDDYAMY	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	26	QQYYTTPST	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	16	AASGFTFDDYAMY	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	25	QQYYTTPST	BBAABBbBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
O	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	16	AASGFTFDDYAMY	BBBLBBAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	12	GISWNSGSIV	BBBAALABBB
O	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	66.7	H3	13	H3-13-*	-1	AKAVSGYFPYFDY	BBBABAABABBBB
O	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
P	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssnnKNYLG	BBABBABBAAALBBBBB
P	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
P	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	25	QQYYTTPST	BBAABBbBB
P	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

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