PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6MJZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	94.4	Hu_IGHV4-59*02	100.0	H1	13	H1-13-*	-1	TVSGGSVSSYYWS	BBBEEBBLABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	94.4	Hu_IGHV4-59*02	66.7	H2	9	H2-9-*	-1	NIYYSGTTK	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	94.4	Hu_IGHV4-59*02	100.0	H3	15	H3-15-*	-1	ARQVKSGwFVQPFDY
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	94.4	Hu_IGHV4-59*02	87.5	H4	8	H4-8-1	22	VDVSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-16*01	97.0	Hu_IGKV1-16*01	81.8	L1	11	L1-11-*	-1	RASQAIANYLA	BBBbBBABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-16*01	97.0	Hu_IGKV1-16*01	87.5	L2	8	L2-8-1	24	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-16*01	97.0	Hu_IGKV1-16*01	71.4	L3	9	L3-9-*	-1	HQYNTYPIT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-16*01	97.0	Hu_IGKV1-16*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024