PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LTG

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	84.6	H1	13	H1-13-1	13	TVSGFSLIRYGVH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	100.0	H2	9	H2-9-1	12	VIWAGGSTN	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	100.0	H3	17	H3-17-*	-1	ARDDgittvvEGYVMDY
A	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	100.0	H4	8	H4-8-1	8	KDNSKSQV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	6	YLASNLES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	71.4	L3	9	L3-9-cis7-1	11	QQNNGVPWT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	7	GSRTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	84.6	H1	13	H1-13-1	11	TVSGFSLIRYGVH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	100.0	H2	9	H2-9-1	11	VIWAGGSTN	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	100.0	H3	17	H3-17-*	-1	ARDDgittvvEGYVMDY
C	heavy	Mus.musculus	Mo_IGHV2-9*02	91.5	Mo_IGHV2-9*02	100.0	H4	8	H4-8-1	7	KDNSKSQV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	100.0	L1	15	L1-15-1	7	RASESVDSYgnsfMH	BBABBABBLLBBBBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	6	YLASNLES	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	71.4	L3	9	L3-9-cis7-2	16	QQNNGVPWT	BBABEBbBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	97.1	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	7	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024