PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6HF1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	100.0	L1	10	L1-10-1	5	SASSSVSYMY	BBABBBABBB
B	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	100.0	L2	8	L2-8-1	4	YRTSNLAS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	87.5	L3	9	L3-9-cis7-1	10	QQYHSYPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	100.0	H1	13	H1-13-1	9	KASGYSFTSYYIH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	80.0	H2	10	H2-10-1	8	WIYPGSYNTE	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	100.0	H3	9	H3-9-2	14	ARSEDWFAY	BBBAABBAB
C	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	100.0	H4	8	H4-8-1	6	ADTSSSTA	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	100.0	L1	10	L1-10-1	7	SASSSVSYMY	BBABBBABBB
E	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	100.0	L2	8	L2-8-1	5	YRTSNLAS	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	87.5	L3	9	L3-9-cis7-1	9	QQYHSYPLT	BBAABBbBB
E	kappa	Mus.musculus	Mo_IGKV4-61*01	98.6	Mo_IGKV4-61*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB
F	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	100.0	H1	13	H1-13-1	11	KASGYSFTSYYIH	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	80.0	H2	10	H2-10-1	9	WIYPGSYNTE	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	100.0	H3	9	H3-9-2	15	ARSEDWFAY	BBBAABBAB
F	heavy	Mus.musculus	Mo_IGHV1-66*01	98.6	Mo_IGHV1-66*01	100.0	H4	8	H4-8-1	8	ADTSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024