PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5WB2

#CDRs = 4; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Human.cytomegalovirus	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	61.5	H1	13	H1-13-*	-1	AASGSIFTIYAMG	BBABBBAABABBB
A	heavy	Human.cytomegalovirus	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	66.7	H2	9	H2-9-1	14	RITFGGDTN	BBBAALBBB
A	heavy	Human.cytomegalovirus	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	100.0	H3	12	H3-12-*	-1	NAEETIVEEADY	BBBBBEALBAAB
A	heavy	Human.cytomegalovirus	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	11	RDNAKNAV	BBAAALBB
D	heavy	Synthetic.construct	Al_IGHV3S65*01_VHH	100.0	Al_IGHV3S65*01_VHH	76.9	H1	13	H1-13-*	-1	AASGYSLEYYAIG	BBBLBBAAABBBB
D	heavy	Synthetic.construct	Al_IGHV3S65*01_VHH	100.0	Al_IGHV3S65*01_VHH	70.0	H2	10	H2-10-*	-1	CISTSVGSTK	BBBABAABBB
D	heavy	Synthetic.construct	Al_IGHV3S65*01_VHH	100.0	Al_IGHV3S65*01_VHH	0.0	H3	22	H3-22-*	-1	GADLSTfyggnyycGDRGIYDY
D	heavy	Synthetic.construct	Al_IGHV3S65*01_VHH	100.0	Al_IGHV3S65*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBABLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024