PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5V6L

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	71.4	H1	14	H1-14-*	-1	TASGFSFSSgFFMC	BBBLBBBBBLBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	63.6	H2	11	H2-11-*	-1	CIYGgSNDNTY	BBBABABBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	100.0	H3	14	H3-14-*	-1	ARDAGTSGYIAYNL	BBBALBLLBBBBAB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	100.0	H4	7	H4-7-1	10	KTSSTTV	BABAABB
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	71.4	H1	14	H1-14-*	-1	TASGFSFSSgFFMC	BBBLBBBBBLBBBB
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	63.6	H2	11	H2-11-*	-1	CIYGgSNDNTY	BBBBEAALBBB
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	100.0	H3	14	H3-14-*	-1	ARDAGTSGYIAYNL	BBBALBLLBBBBAB
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	100.0	H4	7	H4-7-1	10	KTSSTTV	BABAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	45.5	L1	11	L1-11-2	13	QASEDIQRNLA	BBABBALLBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	62.5	L2	8	L2-8-1	10	YGVSNLES	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	22.2	L3	9	L3-9-*	-1	QSALYTSAT
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	66.7	L4	6	L4-6-1	7	GSGTEY	EBEABB
M	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	45.5	L1	11	L1-11-2	12	QASEDIQRNLA	BBABBALLBBB
M	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	62.5	L2	8	L2-8-1	8	YGVSNLES	BLLABBBB
M	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	22.2	L3	9	L3-9-*	-1	QSALYTSAT
M	kappa	Oryctolagus.cuniculus	Rb_IGKV1S36*01	89.7	Rb_IGKV1S36*01	66.7	L4	6	L4-6-1	5	GSGTEY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024