PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5U8R

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	92.3	H1	13	H1-13-1	10	KGSGYTFTDYAIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	60.0	H2	10	H2-10-1	11	VISTYNGNTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	50.0	H3	11	H3-11-*	-1	ASYGDLYVMDY	BBLBBAABBAB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	100.0	Mo_IGKV5-43*01	90.9	L1	11	L1-11-1	22	RASQTISNNLH	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	100.0	Mo_IGKV5-43*01	100.0	L2	8	L2-8-1	25	KYASQSIS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	100.0	Mo_IGKV5-43*01	100.0	L3	9	L3-9-cis7-1	15	QQSNSWPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	100.0	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	19	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024