PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5U4M

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	95.9	CDRLenMismatch	-1.0	H1	16	H1-16-*	-1	VASEfsrFTLDYYAIG
B	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	95.9	CDRLenMismatch	-1.0	H2	11	H2-11-*	-1	SISSSsDGFTS	BBBABAALBBB
B	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	95.9	Al_IGHV3S61*01_VHH	0.0	H3	17	H3-17-*	-1	AARLGgwaSFSPQEYDY
B	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	95.9	Al_IGHV3S61*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024