PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5N88

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	84.6	H1	13	H1-13-1	9	AASGFTFSTFSMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	70.0	H2	10	H2-10-2	5	YISRTSKTIY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	100.0	H3	20	H3-20-*	-1	ARGGWAlgdeipSSFLEFDY
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	75.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	84.6	H1	13	H1-13-1	11	AASGFTFSTFSMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	70.0	H2	10	H2-10-2	9	YISRTSKTIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	100.0	H3	20	H3-20-*	-1	ARGGWAlgdeipSSFLEFDY
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	75.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024