PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5KJR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	91.8	Hu_IGHV4-31*02	86.7	H1	15	H1-15-*	-1	TVSGASISSggYFWS	BAELEbAAABlBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	91.8	Hu_IGHV4-31*02	66.7	H2	9	H2-9-*	-1	NIYYIGNTY	BBBABABBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	91.8	Hu_IGHV4-31*02	100.0	H3	14	H3-14-*	-1	ARVPRLRGGNYFDS	BBBbBAAEEBALBL
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	91.8	Hu_IGHV4-31*02	75.0	H4	8	H4-8-*	-1	VDTTQNQF	BBBLEBEB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	92.9	L1	14	L1-14-*	-1	TGTSSDVGgYKYVS	BBBAABAAeBBABB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	100.0	L2	8	L2-8-1	16	YEVSNRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	88.9	L3	10	L3-10-*	-1	SSYTSSSTWV	BBBBBeBBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	12	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024