PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5E94

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L1	11	L1-11-2	6	RASQDISNYLN	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	5	YYTSRLHS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	8	QQGNTLPFT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	8	GSGTDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	92.9	H1	14	H1-14-*	-1	TVTGYSITsTYDWH	BBBLBBAABLBBBB
B	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	100.0	H2	9	H2-9-1	8	YISYSGSTN	BBBAALBBB
B	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	100.0	H3	16	H3-16-*	-1	ARATAsfYDGSYYFDY
B	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	87.5	H4	8	H4-8-1	8	HDTSKNRF	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L1	11	L1-11-2	6	RASQDISNYLN	BBABBALLBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	7	YYTSRLHS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	8	QQGNTLPFT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	9	GSGTDY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	92.9	H1	14	H1-14-*	-1	TVTGYSITsTYDWH	BBBLBBAABLBBBB
D	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	100.0	H2	9	H2-9-1	6	YISYSGSTN	BBBAALBBB
D	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	100.0	H3	16	H3-16-*	-1	ARATAsfYDGSYYFDY
D	heavy	Mus.musculus	Mo_IGHV3-1*01	94.4	Mo_IGHV3-1*01	87.5	H4	8	H4-8-1	10	HDTSKNRF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024