PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4P49

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	92.3	H1	13	H1-13-1	12	KASGFTFSSYAMG	BBBLBBAAABBBB
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	CDRLenMismatch	-1.0	H2	11	H2-11-*	-1	GISDDGdSYIS	BBBAALAABBB
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	20.0	H3	16	H3-16-*	-1	ARSHCSgcRNAALIDA
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	100.0	H4	8	H4-8-1	5	RDNGQSTV	BBAAALBB
A	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	50.0	L1	8	L1-8-1	19	SGSSGSYG	BLBABBBB
A	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	50.0	L2	8	L2-8-*	-1	YQSNQRPS	BLLABBBA
A	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	33.3	L3	9	L3-9-1	24	GGWGSSVGM	BBBBLLBBB
A	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	83.3	L4	6	L4-6-2	9	KSGSTG	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024