PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4OTX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	100.0	H1	13	H1-13-1	11	KASGYTFTSYWMQ	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	100.0	H2	10	H2-10-1	9	AIYPGDGDTR	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	50.0	H3	6	H3-6-1	11	ARRWDY	BBEAAB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	100.0	H4	8	H4-8-1	8	ADKSSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	100.0	H1	13	H1-13-1	6	KASGYTFTSYWMQ	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	100.0	H2	10	H2-10-1	7	AIYPGDGDTR	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	50.0	H3	6	H3-6-1	14	ARRWDY	BBEAAB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	95.9	Mo_IGHV1-87*01	100.0	H4	8	H4-8-1	6	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L1	17	L1-17-1	6	KSSQSLlnsgnqKNYLT	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	4	YWASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	22	QNDYSYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
M	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L1	17	L1-17-1	7	KSSQSLlnsgnqKNYLT	BBABBABBAAALBBBBB
M	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	22	QNDYSYPLT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	2	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024