PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3SDY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	84.6	H1	13	H1-13-1	13	KASGYTFTSFGVS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	80.0	H2	10	H2-10-1	14	WISAYNGDTY	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	100.0	H3	15	H3-15-*	-1	AREPPLfYSSWSLDN
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	87.5	H4	8	H4-8-1	6	TDTSTTTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	83.3	L1	12	L1-12-2	11	RASQSVSmNYLA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	11	YGASRRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	13	QQYGTSPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024