PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3JAB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	92.3	H1	13	H1-13-1	17	TASGFNIKDYYIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	90.0	H2	10	H2-10-1	8	WIDPEIGDTE	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	100.0	H3	13	H3-13-*	-1	NAGHDYDRGRFPY	BBBBAABALBBAB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	100.0	H4	8	H4-8-1	9	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L1	11	L1-11-1	6	KASQNVGTAVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	6	YSASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L3	9	L3-9-cis7-1	9	QQYSSYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
Q	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	92.3	H1	13	H1-13-1	17	TASGFNIKDYYIH	BBBLBBAAABBBB
Q	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	90.0	H2	10	H2-10-1	8	WIDPEIGDTE	BBBAAALBBB
Q	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	100.0	H3	13	H3-13-*	-1	NAGHDYDRGRFPY	BBBBAABALBBAB
Q	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	100.0	H4	8	H4-8-1	9	ADTSSNTA	BBAAALBB
R	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L1	11	L1-11-1	6	KASQNVGTAVA	BBABBAEABBB
R	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	6	YSASNRYT	BLLABBBB
R	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L3	9	L3-9-cis7-1	9	QQYSSYPLT	BBAABBbBB
R	kappa	Mus.musculus	Mo_IGKV6-13*01	98.6	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024