PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2YC1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	7	TGSGFTFDNYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	60.0	H2	10	H2-10-4	10	GISRSSGDID	BBBBLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	33.3	H3	10	H3-10-1	25	ARGGVGSFDT	BBBALLBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	62.5	H4	8	H4-8-1	7	RDDAKKTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	5	RASQSVRSYLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	87.5	L2	8	L2-8-1	8	SDASNRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	42.9	L3	9	L3-9-cis7-1	8	QQYRYSPRT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	7	TGSGFTFDNYAMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	60.0	H2	10	H2-10-4	10	GISRSSGDID	BBBBLLABBB
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	33.3	H3	10	H3-10-1	25	ARGGVGSFDT	BBBALLBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-9*01	87.7	Hu_IGHV3-9*01	62.5	H4	8	H4-8-1	6	RDDAKKTL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	5	RASQSVRSYLA	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	87.5	L2	8	L2-8-1	7	SDASNRAT	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	42.9	L3	9	L3-9-cis7-1	8	QQYRYSPRT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

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