PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2W65

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	8	KASGYTFTDYSIH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	100.0	H2	10	H2-10-1	13	WINTETGEPT	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	100.0	H3	11	H3-11-*	-1	ARATTATELAY	BBBBAABABAB
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	87.5	H4	8	H4-8-1	12	LESSASTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	7	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L2	8	L2-8-1	8	YLVSKLDS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	10	WQGTHFPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	9	KASGYTFTDYSIH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	100.0	H2	10	H2-10-1	12	WINTETGEPT	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	100.0	H3	11	H3-11-*	-1	ARATTATELAY	BBBBAABABAB
C	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	87.5	H4	8	H4-8-*	-1	LESSASTA	BBAABBBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	5	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L2	8	L2-8-1	7	YLVSKLDS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	11	WQGTHFPLT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024