PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1HIL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	9	TSSQSLfnsgkqKNYLT	BBABBABBAAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	85.7	L3	9	L3-9-cis7-1	12	QNDYSNPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	92.3	H1	13	H1-13-1	8	AASGFSFSSYGMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	80.0	H2	10	H2-10-2	7	TISNGGGYTY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H3	13	H3-13-*	-1	ARRERYDENGFAY	BBBBBLLAEEBBL
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	9	TSSQSLfnsgkqKNYLT	BBABBABBAAALBBBBB
C	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	85.7	L3	9	L3-9-cis7-1	12	QNDYSNPLT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV8-19*01	98.6	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	92.3	H1	13	H1-13-1	9	AASGFSFSSYGMS	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	80.0	H2	10	H2-10-2	8	TISNGGGYTY	BBBAALABBB
D	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H3	13	H3-13-*	-1	ARRERYDENGFAY	BBBBBLLAEEBBL
D	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024