PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 8CW9

#CDRs = 8; #Clusters = 16.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	100.0	L1	14	L1-14-3	22	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	75.0	L2	8	L2-8-4	28	YDNNNRPS	BEABBBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	88.9	L3	10	L3-10-3	16	QSYDRSLSGV	BBBBAAAEBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	100.0	L4	6	L4-6-*	-1	KSGTSA	BBAABB
C	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	86.7	H1	15	H1-15-1	13	TFSGFALTTSGMcvS	BBBLBBAABBLBBBB
C	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	66.7	H2	9	H2-9-1	15	RIDWEDNTY	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	66.7	H3	16	H3-16-*	-1	ARSYITdwKKDWFFDL
C	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	87.5	H4	8	H4-8-*	-1	KDPSKNQV	BBAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	72.7	L1	11	L1-11-4	15	SGDGLPKKYAH	BEAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	100.0	L2	8	L2-8-*	-1	YKDSERPS	ABAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	55.6	L3	11	L3-11-2	18	QSGDSTDTSVI	BBBBAALABBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	21	SSGTTV	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	12	AASGFTFSSYSMN	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	70.0	H2	10	H2-10-2	16	SISASSSYSD	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	100.0	H3	17	H3-17-*	-1	ARARATGYSSitpYFDI
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	87.5	H4	8	H4-8-*	-1	RDNAKTSL	BBABEBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	86.7	H1	15	H1-15-1	11	TFSGFALTTSGMcvS	BBBLBBAABBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	66.7	H2	9	H2-9-1	17	RIDWEDNTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	66.7	H3	16	H3-16-*	-1	ARSYITdwKKDWFFDL
H	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	87.5	H4	8	H4-8-*	-1	KDPSKNQV	BBAABBBB
I	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	86.7	H1	15	H1-15-1	20	TFSGFALTTSGMcvS	BBBLBBAABBLBBBB
I	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	66.7	H2	9	H2-9-1	14	RIDWEDNTY	BBBAALBBB
I	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	66.7	H3	16	H3-16-*	-1	ARSYITdwKKDWFFDL
I	heavy	Homo.sapiens	Hu_IGHV2-70*15	90.4	Hu_IGHV2-70*15	87.5	H4	8	H4-8-*	-1	KDPSKNQV	BBAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	13	AASGFTFSSYSMN	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	70.0	H2	10	H2-10-2	18	SISASSSYSD	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	100.0	H3	17	H3-17-*	-1	ARARATGYSSitpYFDI
J	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	87.5	H4	8	H4-8-*	-1	RDNAKTSL	BBABEBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	72.7	L1	11	L1-11-4	15	SGDGLPKKYAH	BBAAAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	100.0	L2	8	L2-8-*	-1	YKDSERPS	ABAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	55.6	L3	11	L3-11-2	17	QSGDSTDTSVI	BBBBAALABBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	15	SSGTTV	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	72.7	L1	11	L1-11-4	16	SGDGLPKKYAH	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	100.0	L2	8	L2-8-*	-1	YKDSERPS	ABAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	55.6	L3	11	L3-11-2	17	QSGDSTDTSVI	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	83.6	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	25	SSGTTV	BBEABB
M	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	100.0	L1	14	L1-14-3	17	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
M	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	75.0	L2	8	L2-8-*	-1	YDNNNRPS	ABBLBBBB
M	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	88.9	L3	10	L3-10-3	24	QSYDRSLSGV	BBBBAAAEBB
M	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	100.0	L4	6	L4-6-2	31	KSGTSA	BBEABB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	12	AASGFTFSSYSMN	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	70.0	H2	10	H2-10-2	15	SISASSSYSD	BBBAALABBB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	100.0	H3	17	H3-17-*	-1	ARARATGYSSitpYFDI
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.2	Hu_IGHV3-21*01	87.5	H4	8	H4-8-*	-1	RDNAKTSL	BBABEBBB
O	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	100.0	L1	14	L1-14-*	-1	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
O	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	75.0	L2	8	L2-8-*	-1	YDNNNRPS	ABAABBBB
O	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	88.9	L3	10	L3-10-3	25	QSYDRSLSGV	BBBBAAAEBB
O	lambda	Homo.sapiens	Hu_IGLV1-40*02	98.5	Hu_IGLV1-40*02	100.0	L4	6	L4-6-*	-1	KSGTSA	BBEBLB

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