PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7ZXG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	92.3	H1	13	H1-13-1	13	AASGFTFSNYAMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	80.0	H2	10	H2-10-2	15	TISSGASYTH	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	50.0	H3	16	H3-16-*	-1	GRQVNRHdrALDAMDY
B	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	21	KSSQSLfyssnqKNYLA	BBABBBBBAAALBBBBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	25	YWASTRES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	15	QQYYSYPPT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	92.3	H1	13	H1-13-1	13	AASGFTFSNYAMS	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	80.0	H2	10	H2-10-2	15	TISSGASYTH	BBBAALABBB
E	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	50.0	H3	16	H3-16-*	-1	GRQVNRHdrALDAMDY
E	heavy	Mus.musculus	Mo_IGHV5-9-1*01	97.3	Mo_IGHV5-9-1*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	21	KSSQSLfyssnqKNYLA	BBABBBBBAAALBBBBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	25	YWASTRES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	15	QQYYSYPPT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024