PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WO4

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYWMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	19	NINQDGGEKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWYYYGPRDY	BBBABABBBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	17	RDNAKNSL	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L1	13	L1-13-*	-1	TRSSGSIASNYVQ	BBAABBAAABBBB
E	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	18	YEDNQRPS	BLLABBBB
E	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	85.7	L3	11	L3-11-*	-1	QSYDGSNHNVV	BBBBEAALBBB
E	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	13	idSSSNSA	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	23	AASGFTFSSYWMS	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	21	NINQDGGEKY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWYYYGPRDY	BBBABABBBBAB
F	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	15	RDNAKNSL	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	16	TRSSGSIASNYVQ	BBABEBAAABBBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	24	YEDNQRPS	BLLABBBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	85.7	L3	11	L3-11-*	-1	QSYDGSNHNVV	BBBBEAALBBB
G	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	22	idSSSNSA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYWMS	BBBEBBBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBAAAABBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWYYYGPRDY	BBBABAABBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L1	13	L1-13-*	-1	TRSSGSIASNYVQ	BBABEBAAABBBB
I	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L2	8	L2-8-*	-1	YEDNQRPS	BLAABBBB
I	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	85.7	L3	11	L3-11-*	-1	QSYDGSNHNVV	BBBABAALBBB
I	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	21	idSSSNSA	BBAAALBB
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYWMS	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	19	NINQDGGEKY	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWYYYGPRDY	BBBABABBBBAB
M	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	17	RDNAKNSL	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L1	13	L1-13-*	-1	TRSSGSIASNYVQ	BBAABBAAABBBB
N	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	19	YEDNQRPS	BLLABBBB
N	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	85.7	L3	11	L3-11-*	-1	QSYDGSNHNVV	BBBBEAALBBB
N	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	14	idSSSNSA	BBAAALBB
O	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	23	AASGFTFSSYWMS	BBBLBBAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	80.0	H2	10	H2-10-2	22	NINQDGGEKY	BBBAALABBB
O	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWYYYGPRDY	BBBABABBBBAB
O	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	15	RDNAKNSL	BBAAALBB
P	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	16	TRSSGSIASNYVQ	BBABEBAAABBBB
P	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	24	YEDNQRPS	BLLABBBB
P	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	85.7	L3	11	L3-11-*	-1	QSYDGSNHNVV	BBBBEAALBBB
P	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	22	idSSSNSA	BBAAALBB
Q	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYWMS	BBBEBBBAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	80.0	H2	10	H2-10-*	-1	NINQDGGEKY	BBBAAAABBB
Q	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWYYYGPRDY	BBBABAABBBAB
Q	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
R	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L1	13	L1-13-*	-1	TRSSGSIASNYVQ	BBABEBAAABBBB
R	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L2	8	L2-8-*	-1	YEDNQRPS	BLAABBBB
R	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	85.7	L3	11	L3-11-*	-1	QSYDGSNHNVV	BBBABAALBBB
R	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	20	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024