PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WKA

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
a	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	84.6	H1	13	H1-13-1	13	KASGYSFTRFWMN	BBBLBBAAABBBB
a	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	100.0	H2	10	H2-10-1	17	MIHPSDSETR	BBBAAALBBB
a	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	0.0	H3	13	H3-13-*	-1	ARKDYDYDAWFAY	BBBBBBEBBBBAB
a	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	11	VDKSSTTA	BBAAALBB
b	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	86.7	L1	15	L1-15-*	-1	RASKSVSasvySYMH	BBABBABBLEBBBBB
b	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	87.5	L2	8	L2-8-1	24	YLASSLES	BLLABBBB
b	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	15	HHSRELPPA	BBAABBbBB
b	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
c	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	84.6	H1	13	H1-13-1	12	KASGYSFTRFWMN	BBBLBBAAABBBB
c	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	100.0	H2	10	H2-10-1	17	MIHPSDSETR	BBBAAALBBB
c	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	0.0	H3	13	H3-13-*	-1	ARKDYDYDAWFAY	BBBBBBEBBBBAB
c	heavy	Mus.musculus	Mo_IGHV1S82*01	98.4	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	12	VDKSSTTA	BBAAALBB
d	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	86.7	L1	15	L1-15-1	17	RASKSVSasvySYMH	BBABBABBLLBBBBB
d	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	87.5	L2	8	L2-8-*	-1	YLASSLES	BLEABBBB
d	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	13	HHSRELPPA	BBAABBbBB
d	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024