PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RXJ

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	10	VASGFNFTTYSMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	70.0	H2	10	H2-10-2	15	YISSHSNLIY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	100.0	H3	17	H3-17-*	-1	ARGGSLHpsaGADWIDP
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	22	SGDKLGDKFTS	BBABAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	15	YQDSKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L3	9	L3-9-1	11	QAWDSNTYV	BBBBLLBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	15	NSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	12	VASGFNFTTYSMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	70.0	H2	10	H2-10-2	10	YISSHSNLIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	100.0	H3	17	H3-17-*	-1	ARGGSLHpsaGADWIDP
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-3	7	SGDKLGDKFTS	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	9	YQDSKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L3	9	L3-9-1	15	QAWDSNTYV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	22	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024