PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RW2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYYMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	90.0	H2	10	H2-10-1	15	VINPSGGSTS	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H3	27	H3-27-*	-1	ARDRephsdssgywdslKYYYYYALDV
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	12	RDTSTSTV	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	90.0	H2	10	H2-10-1	15	VINPSGGSTS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H3	27	H3-27-*	-1	ARDRephsdssgywdslKYYYYYALDV
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	12	RDTSTSTV	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYYMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	90.0	H2	10	H2-10-1	15	VINPSGGSTS	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H3	27	H3-27-*	-1	ARDRephsdssgywdslKYYYYYALDV
I	heavy	Homo.sapiens	Hu_IGHV1-46*01	97.3	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	12	RDTSTSTV	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	18	RASQGISSYLA	BBABBAEABBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	15	YAASTLQS	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	85.7	L3	9	L3-9-cis7-1	11	QQLNTYPFT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	18	RASQGISSYLA	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	15	YAASTLQS	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	85.7	L3	9	L3-9-cis7-1	11	QQLNTYPFT	BBAABBbBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	18	RASQGISSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	15	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	85.7	L3	9	L3-9-cis7-1	11	QQLNTYPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024