PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PS4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	92.3	H1	13	H1-13-1	9	KGSGYSFTNYWIG	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	9	IIYPGDSGTR	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H3	18	H3-18-*	-1	ARSRVgatgGYYDYYMDV
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	10	ADKSIRTA	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	84.6	L1	13	L1-13-1	7	SGSSSNLGGNTVN	BBBAAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	10	YSNNQRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L3	11	L3-11-1	11	AAWDDSLNGPV	BBBBAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	92.3	H1	13	H1-13-1	10	KGSGYSFTNYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	9	IIYPGDSGTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H3	18	H3-18-*	-1	ARSRVgatgGYYDYYMDV
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	9	ADKSIRTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	84.6	L1	13	L1-13-1	8	SGSSSNLGGNTVN	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	11	YSNNQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L3	11	L3-11-1	10	AAWDDSLNGPV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024