PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PHV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	76.9	H1	13	H1-13-*	-1	KGSGFTFSSYEMQ	BBBLBBBLABBBB
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	50.0	H2	10	H2-10-4	9	DICIGGSYTG	BBBBLLABBB
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	60.0	H3	18	H3-18-*	-1	AKTARSDYcitgLDDIDA
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	87.5	H4	8	H4-8-1	12	RDDGQSTV	BBAAALBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	62.5	L1	8	L1-8-*	-1	SGGSSDYG	ABEABBBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	62.5	L2	8	L2-8-*	-1	YENNKRPS	ABAABBBA
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	44.4	L3	9	L3-9-*	-1	GSRDTNNGA	BBBBAABBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	66.7	L4	6	L4-6-2	23	KFGSTH	BBEABB
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	76.9	H1	13	H1-13-*	-1	KGSGFTFSSYEMQ	BBBEBBBLABBBB
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	50.0	H2	10	H2-10-4	10	DICIGGSYTG	BBBBLLABBB
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	60.0	H3	18	H3-18-*	-1	AKTARSDYcitgLDDIDA
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	93.1	Ch_IGHV1S1*01	87.5	H4	8	H4-8-1	16	RDDGQSTV	BBAAALBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	62.5	L1	8	L1-8-*	-1	SGGSSDYG	ABEABBBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	62.5	L2	8	L2-8-*	-1	YENNKRPS	ABAABBBA
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	44.4	L3	9	L3-9-*	-1	GSRDTNNGA	BBBALAAEB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	93.9	Ch_IGLV1-1*02	66.7	L4	6	L4-6-2	29	KFGSTH	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024