PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7M3I

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	100.0	H1	13	H1-13-4	19	TVSGGSISSYYWS	BBBLBBABLBBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	88.9	H2	9	H2-9-1	11	YVYYSGSTN	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	100.0	H3	15	H3-15-*	-1	ASSQRPdGNLYYFDY
A	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	87.5	H4	8	H4-8-1	13	VDTSKNEF	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	90.9	L1	11	L1-11-3	8	GGNNIGSKTVH	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-*	-1	YDDSDRPS	BLLABBBA
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	11	L3-11-1	10	QVWDSSSDHYV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-*	-1	NSGNTA	BBLLBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	100.0	H1	13	H1-13-*	-1	TVSGGSISSYYWS	BBAABBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	88.9	H2	9	H2-9-1	11	YVYYSGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	100.0	H3	15	H3-15-*	-1	ASSQRPdGNLYYFDY
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	98.6	Hu_IGHV4-59*03	87.5	H4	8	H4-8-1	13	VDTSKNEF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	90.9	L1	11	L1-11-3	8	GGNNIGSKTVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	15	YDDSDRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	11	L3-11-1	10	QVWDSSSDHYV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024