PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LF7

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	76.9	H1	13	H1-13-1	5	TASGFTFSRCAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	50.0	H2	10	H2-10-2	10	AISRDSTYTY	BBBAALABBB
A	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	100.0	H3	14	H3-14-*	-1	ARQIDDYYVDALDY	BBBBAABABBBBAB
A	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	90.9	L1	11	L1-11-1	7	RASKIISKYLA	BBABBAEABBB
B	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	87.5	L2	8	L2-8-1	5	YSGFTLQS	BLLABBBB
B	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	87.5	L3	9	L3-9-cis7-1	9	QQHNEYPLT	BBAABBbBB
B	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	100.0	L4	6	L4-6-1	24	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	76.9	H1	13	H1-13-*	-1	TASGFTFSRCAMS
H	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	50.0	H2	10	H2-10-2	10	AISRDSTYTY	BBBAALABBB
H	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	100.0	H3	14	H3-14-*	-1	ARQIDDYYVDALDY	BBBBAABABBBBAB
H	heavy	Homo.sapiens	Mo_IGHV5-9-1*01	94.5	Mo_IGHV5-9-1*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	90.9	L1	11	L1-11-1	7	RASKIISKYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	87.5	L2	8	L2-8-1	5	YSGFTLQS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	87.5	L3	9	L3-9-cis7-1	9	QQHNEYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV16-104*01	98.6	Mo_IGKV16-104*01	100.0	L4	6	L4-6-1	24	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024