PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7L79

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	61.5	H1	13	H1-13-1	11	KASGYIFTDYLIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	50.0	H2	10	H2-10-1	14	RINTNAGLMY	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	0.0	H3	15	H3-15-*	-1	GRVVDGfNAAGPLEF
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	0.0	H4	13	H4-13-*	-1	RvvdwrTPSLGTV
B	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	CDRLenMismatch	-1.0	L1	11	L1-11-1	14	RASQYVDRSIS	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	Hu_IGKV3-OR2-268*01	50.0	L2	8	L2-8-1	9	YAASSRSI	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	Hu_IGKV3-OR2-268*01	71.4	L3	9	L3-9-cis7-1	10	QQDYYWPVT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	Hu_IGKV3-OR2-268*01	83.3	L4	6	L4-6-1	13	GSGRDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	61.5	H1	13	H1-13-1	10	KASGYIFTDYLIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	50.0	H2	10	H2-10-1	12	RINTNAGLMY	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	0.0	H3	15	H3-15-*	-1	GRVVDGfNAAGPLEF
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	61.7	Hu_IGHV7-4-1*03	0.0	H4	13	H4-13-*	-1	RvvdwrTPSLGTV
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	CDRLenMismatch	-1.0	L1	11	L1-11-1	16	RASQYVDRSIS	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	Hu_IGKV3-OR2-268*01	50.0	L2	8	L2-8-1	7	YAASSRSI	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	Hu_IGKV3-OR2-268*01	71.4	L3	9	L3-9-cis7-1	9	QQDYYWPVT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	75.0	Hu_IGKV3-OR2-268*01	83.3	L4	6	L4-6-1	16	GSGRDF	EEEABB

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