PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7L2E

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H1	13	H1-13-1	13	AASGFTFSSYGMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	90.0	H2	10	H2-10-2	14	VISYDGSNKH	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	15	H3-15-*	-1	AKDSGYNYgYSWFDP
G	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H1	13	H1-13-1	13	AASGFTFSSYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	90.0	H2	10	H2-10-2	14	VISYDGSNKH	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	15	H3-15-*	-1	AKDSGYNYgYSWFDP
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H1	13	H1-13-1	13	AASGFTFSSYGMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	90.0	H2	10	H2-10-2	14	VISYDGSNKH	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	15	H3-15-*	-1	AKDSGYNYgYSWFDP
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	81.8	L1	11	L1-11-4	8	SADALAKQYAY	BBAAAAABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	14	YKDSERPS	BLLABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	77.8	L3	13	L3-13-*	-1	QSTDNSGTypNWV	BBBBAABABBBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	24	SSGTTV	BBEABB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	81.8	L1	11	L1-11-4	8	SADALAKQYAY	BBAAAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	14	YKDSERPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	77.8	L3	13	L3-13-*	-1	QSTDNSGTypNWV	BBBBAABABBBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	24	SSGTTV	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	81.8	L1	11	L1-11-4	8	SADALAKQYAY	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L2	8	L2-8-1	14	YKDSERPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	77.8	L3	13	L3-13-*	-1	QSTDNSGTypNWV	BBBBAABABBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	24	SSGTTV	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024