PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JXD

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	92.3	H1	13	H1-13-1	8	AASGFTFSSYWMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	14	NIKQDGSEKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWWLRGSFDY	BBBABAABBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	6	RDNAKNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L1	13	L1-13-*	-1	TGSSGSIASNYVQ	BBBLEBAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L2	8	L2-8-1	10	YEDNQRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L3	10	L3-10-1	18	QSYDSSNHVV	BBBBAALBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L4	8	L4-8-1	6	idSSSNSA	BBAAALBB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	92.3	H1	13	H1-13-1	13	AASGFTFSSYWMN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	9	NIKQDGSEKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H3	12	H3-12-*	-1	ARVWWLRGSFDY	BBBABAABBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	98.6	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	5	RDNAKNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L1	13	L1-13-*	-1	TGSSGSIASNYVQ	BBBLEBAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L2	8	L2-8-1	10	YEDNQRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L3	10	L3-10-*	-1	QSYDSSNHVV	BBBBAALBBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*02	100.0	Hu_IGLV6-57*02	100.0	L4	8	L4-8-1	8	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024