PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JMP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	100.0	H1	13	H1-13-1	14	AASGFTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	77.8	H2	9	H2-9-1	5	VIYTGGTTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	100.0	H3	17	H3-17-*	-1	ARAHVDTamvESGAFDI
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L1	14	L1-14-2	6	TGTSSDVGSyNLVS	BBBAAAAAABBABB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	87.5	L2	8	L2-8-1	9	YEVTKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	88.9	L3	10	L3-10-2	5	CSYAGSSTWV	BBBAELLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L4	6	L4-6-2	7	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024