PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JKB

#CDRs = 4; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	53.8	H1	13	H1-13-1	19	AASGFRISDEDMG	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	SIYGPSGSTY	BBBEAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	13	H3-13-*	-1	ASALEPLSEPLGF	BBBALAABABABB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	69.2	H1	13	H1-13-*	-1	AASGFTVSYESMG	BBBLBBBBBBBBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	CDRLenMismatch	-1.0	H2	10	H2-10-2	10	AISSSGGSTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	0.0	H3	18	H3-18-*	-1	VTPERQCKQstcyARPRY
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	6	RDNSKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024