PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CW3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
k	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H1	13	H1-13-*	-1	KASGYAFSSYWMN
k	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H2	10	H2-10-*	-1	QIYPGDGDTN
k	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H3	9	H3-9-*	-1	ARGGLTIDY
k	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H4	8	H4-8-*	-1	ADKSSSTA
l	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	90.9	L1	11	L1-11-*	-1	RASQSISDNLH
l	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS
l	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-*	-1	QQSNSWPYT
l	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-*	-1	GSGTDF
m	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H1	13	H1-13-*	-1	KASGYAFSSYWMN
m	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H2	10	H2-10-*	-1	QIYPGDGDTN
m	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H3	9	H3-9-*	-1	ARGGLTIDY
m	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H4	8	H4-8-*	-1	ADKSSSTA
n	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	90.9	L1	11	L1-11-*	-1	RASQSISDNLH
n	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS
n	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-*	-1	QQSNSWPYT
n	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-*	-1	GSGTDF
o	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H1	13	H1-13-*	-1	KASGYAFSSYWMN
o	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H2	10	H2-10-*	-1	QIYPGDGDTN
o	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H3	9	H3-9-*	-1	ARGGLTIDY
o	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H4	8	H4-8-*	-1	ADKSSSTA
p	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	90.9	L1	11	L1-11-*	-1	RASQSISDNLH
p	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS
p	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-*	-1	QQSNSWPYT
p	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-*	-1	GSGTDF
q	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H1	13	H1-13-*	-1	KASGYAFSSYWMN
q	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H2	10	H2-10-*	-1	QIYPGDGDTN
q	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H3	9	H3-9-*	-1	ARGGLTIDY
q	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H4	8	H4-8-*	-1	ADKSSSTA
r	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	90.9	L1	11	L1-11-*	-1	RASQSISDNLH
r	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS
r	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-*	-1	QQSNSWPYT
r	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-*	-1	GSGTDF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024