PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CHC

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	69.2	H1	13	H1-13-*	-1	AASGFAFTTYAMN	BBAABBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	70.0	H2	10	H2-10-*	-1	AISDGGGSAY	BBBBLEEBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	100.0	H3	18	H3-18-*	-1	AKTRGRGLYDYVwgskDY
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	16	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	15	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	6	YLGSNRAS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L3	9	L3-9-2	15	MQALQTPGT	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	98.6	Ca_IGHV1S1*01	61.5	H1	13	H1-13-*	-1	AASEFIVSRNYMS	BBAABBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	98.6	Ca_IGHV1S1*01	77.8	H2	9	H2-9-1	12	VIYSGGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	98.6	Hu_IGHV3-66*03	100.0	H3	11	H3-11-*	-1	ARDYGDYYFDY	BBBBLLABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	98.6	Hu_IGHV3-66*03	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Ca_IGKV1-7*01	63.6	L1	11	L1-11-1	8	RASQGVSSFLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Ca_IGKV1-7*01	62.5	L2	8	L2-8-1	15	HGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L3	9	L3-9-*	-1	QQYGSSPRT	BBBABEBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024