PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7AMP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	93.2	Hu_IGHV1-2*07	92.3	H1	13	H1-13-1	12	KASGYTFTGYVMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	93.2	Hu_IGHV1-2*07	30.0	H2	10	H2-10-1	13	FINPYNDDIQ	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	93.2	Hu_IGHV1-2*07	100.0	H3	17	H3-17-*	-1	ARGAGYNfdgAYRFFDF
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	93.2	Hu_IGHV1-2*07	100.0	H4	8	H4-8-1	6	RDTSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	68.8	L1	16	L1-16-1	11	RSSQRLvhsngNTYLH	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	50.0	L2	8	L2-8-1	9	YRVSNRFP	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	28.6	L3	9	L3-9-cis7-1	13	SQSTHVPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024