PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XUL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	9	EASGFTFEAYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	60.0	H2	10	H2-10-2	9	SINWNSGRIA	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDIRrfSTGGAEFEY
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	6	RDNARNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	7	SGSSSNIGSNFVY	BBBAAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L2	8	L2-8-1	7	YRNNQRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDDSLgGHYV
B	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	83.3	L4	6	L4-6-2	10	RSGTSA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	10	EASGFTFEAYAMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	60.0	H2	10	H2-10-2	10	SINWNSGRIA	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDIRrfSTGGAEFEY
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	6	RDNARNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	7	SGSSSNIGSNFVY	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L2	8	L2-8-1	13	YRNNQRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDDSLgGHYV
D	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	83.3	L4	6	L4-6-2	16	RSGTSA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	10	EASGFTFEAYAMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	60.0	H2	10	H2-10-2	10	SINWNSGRIA	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDIRrfSTGGAEFEY
E	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	5	RDNARNSL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	8	SGSSSNIGSNFVY	BBBAAAAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L2	8	L2-8-1	10	YRNNQRPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDDSLgGHYV
F	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	83.3	L4	6	L4-6-2	17	RSGTSA	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	9	EASGFTFEAYAMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	60.0	H2	10	H2-10-2	10	SINWNSGRIA	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDIRrfSTGGAEFEY
G	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	6	RDNARNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	8	EASGFTFEAYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	60.0	H2	10	H2-10-2	12	SINWNSGRIA	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDIRrfSTGGAEFEY
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	6	RDNARNSL	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	9	SGSSSNIGSNFVY	BBBAAAAAABBBB
I	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L2	8	L2-8-1	10	YRNNQRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDDSLgGHYV
I	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	83.3	L4	6	L4-6-2	8	RSGTSA	BBEABB
J	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	76.9	H1	13	H1-13-1	10	EASGFTFEAYAMH	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	60.0	H2	10	H2-10-2	10	SINWNSGRIA	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKDIRrfSTGGAEFEY
J	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	4	RDNARNSL	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	10	SGSSSNIGSNFVY	BBBAAAAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L2	8	L2-8-1	10	YRNNQRPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDDSLgGHYV
K	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	83.3	L4	6	L4-6-2	18	RSGTSA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	92.3	L1	13	L1-13-1	8	SGSSSNIGSNFVY	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L2	8	L2-8-1	13	YRNNQRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	88.9	L3	12	L3-12-*	-1	AAWDDSLgGHYV
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	83.3	L4	6	L4-6-2	14	RSGTSA	BBEABB

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