PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WN1

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	69.2	H1	13	H1-13-1	16	AVSGFTFRNYALS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	70.0	H2	10	H2-10-2	10	TISASGGATY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	50.0	H3	15	H3-15-*	-1	ARDGGSYTPYfFLDS
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	12	RDNSKNIL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	12	GGNSIGRKSIH	BEBLAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	15	SYDSDRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	66.7	L3	11	L3-11-1	11	QVRDSDNDHVV	BBBBAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	69.2	H1	13	H1-13-1	19	AVSGFTFRNYALS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	70.0	H2	10	H2-10-2	15	TISASGGATY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	50.0	H3	15	H3-15-*	-1	ARDGGSYTPYfFLDS
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	9	RDNSKNIL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	72.7	L1	11	L1-11-4	26	GGNSIGRKSIH	BBABAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	15	SYDSDRPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	66.7	L3	11	L3-11-1	20	QVRDSDNDHVV	BBBBAAALBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	89.6	Hu_IGLV3-21*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024